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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104531011_104537776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104531011 - 104537776

Intron Length:

6766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTACTTTTATT

Flanking Amino Acid:

YDTKHMLPAECIKELCLLLL

Intron Amino Acid Position:

2125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

90.6

0.91

0.7

88.8

26.8

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

66.6

0.6

1.6

84.49

36.1

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125