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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1045496_1047873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1045496 - 1047873

Intron Length:

2378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

GATGGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTTTCCAGGAGA

Flanking Amino Acid:

AAHTREMLDTVLNALDELGD

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.9

39.6

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

70.5

0.46

61.4

44.3

Minor 5ss

40.1

-1.1

2.8

45.2

Minor BPS

49.9

-0

2.1

72.47

39.2

Associated Gene:

Gene:

SPTLC3

Ensembl Gene ID:

ENSAPLG00000011146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048085

964035 - 1047987

83953

ENSAPLT00000011600

954416 - 1047987

93572