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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104586932_104587919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104586932 - 104587919

Intron Length:

988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTATATTTCATT

Flanking Amino Acid:

LLKKFKAVAPGLNYKNLIDE

Intron Amino Acid Position:

1706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

69.9

0.45

0.9

65.9

34.7

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

55.2

0.24

1.9

77.42

39.4

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125