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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104611464_104616894_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

104611464 - 104616894

Intron Length:

5431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATA

5'SS Class:

strong_major

3'SS Sequence:

AGCTTTTAGAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTATTTCTAAGT

Flanking Amino Acid:

EGKNLLPTTEVCALNIVCLL

Intron Amino Acid Position:

1468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

80.5

33.7

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

53.6

0.08

1.2

42.5

Minor 5ss

41.9

-0.9

3.1

56.7

47.6

Minor BPS

54.1

0.21

1.9

76.75

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125