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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104627950_104629538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104627950 - 104629538

Intron Length:

1589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGTAA

5'SS Class:

major

3'SS Sequence:

TGTTCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

GCTTGCTTAACT

Flanking Amino Acid:

SMHCQELMTAGYSKSWEVCS

Intron Amino Acid Position:

1260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

70.3

31.2

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

82.4

0.73

0.8

77.7

Minor 5ss

29.9

-2.3

3.3

37.1

47.5

Minor BPS

0.77

1.8

84.57

42.1

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125