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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104667112_104667853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104667112 - 104667853

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTACTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGATTTTAATT

Flanking Amino Acid:

TTPEELYQRKIDNEEYGEAL

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

83.3

27.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.6

0.78

0.8

81.3

Minor 5ss

34.6

-1.7

2.8

44.2

Minor BPS

63.5

0.5

1.3

72.55

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125