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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104672643_104676013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104672643 - 104676013

Intron Length:

3371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAAGG

5'SS Class:

major

3'SS Sequence:

CAATGTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

TTTTTGCTGACA

Flanking Amino Acid:

RFYSRRGTEQDGIFKMNLSP

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

60.9

43.5

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

65.9

0.36

1.1

61.4

Minor 5ss

-1.2

2.8

49.5

46.3

Minor BPS

49.8

-0

2.3

74.62

36.9

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125