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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104685712_104686469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104685712 - 104686469

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGAGTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCTCTCTCAATG

Flanking Amino Acid:

MGSELLVISPTASFPGDLSY

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.2

34.7

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

0.29

1.2

63.6

40.9

Minor 5ss

35.8

-1.6

3.3

51.5

44.9

Minor BPS

0.05

1.6

60.48

41.9

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125