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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104701049_104702040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

104701049 - 104702040

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTCTTTCCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTGTATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

45.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.79

0.6

80.9

24.6

Minor 5ss

-1.3

2.8

52.4

44.2

Minor BPS

50.2

0.09

2.1

76.57

39.8

Associated Gene:

Gene:

DDX1

Ensembl Gene ID:

ENSAPLG00000011093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011668

104700997 - 104718747

17751