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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104705240_104705672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104705240 - 104705672

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GCCTTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

AAGGCCTTACTG

Flanking Amino Acid:

WSTMQASLDLGTDKFGFGFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

78.3

32.5

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

79.2

0.66

0.9

75.9

Minor 5ss

38.9

-1.3

2.9

44.3

43.6

Minor BPS

48.9

-0.2

1.8

50.39

44.2

Associated Gene:

Gene:

DDX1

Ensembl Gene ID:

ENSAPLG00000011093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011668

104700997 - 104718747

17751