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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104711642_104712193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104711642 - 104712193

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGAGT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGATCTTCAGTG

Flanking Amino Acid:

QITSDGKRLQVIVCSATLHS

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

68.5

42.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

92.7

0.96

0.6

92.4

17.8

Minor 5ss

39.4

-1.2

3.3

57.4

46.9

Minor BPS

47.7

-0.3

1.8

53.31

41.9

Associated Gene:

Gene:

DDX1

Ensembl Gene ID:

ENSAPLG00000011093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011668

104700997 - 104718747

17751