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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104712383_104714807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104712383 - 104714807

Intron Length:

2425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

GTTTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATGAA

U12 Branch Point Sequence:

AGTGGCTGAAGG

Flanking Amino Acid:

WERLGKNHIRTDEVHAKDNT

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

55.3

0.13

1.1

47.4

Major PPT

83.1

0.74

0.8

77.1

37.1

Minor 5ss

35.7

-1.6

3.3

45.7

43.5

Minor BPS

42.2

-0.7

2.2

47.16

45.6

Associated Gene:

Gene:

DDX1

Ensembl Gene ID:

ENSAPLG00000011093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011668

104700997 - 104718747

17751