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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104717081_104717196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104717081 - 104717196

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCCATTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

CCCCCATTATTT

Flanking Amino Acid:

HRIGRVGRAERMGLAISLVA

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

76.2

0.59

0.9

72.8

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

46.1

-0.2

1.9

57.89

45.4

Associated Gene:

Gene:

DDX1

Ensembl Gene ID:

ENSAPLG00000011093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011668

104700997 - 104718747

17751