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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104997514_104998647_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

104997514 - 104998647

Intron Length:

1134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCACCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

CTTTCTTTACTT

Flanking Amino Acid:

SSGDDTLSDSDDEDEEEEDE

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

0.09

1.1

54.1

34.7

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

68.9

0.67

1.6

82.98

39.3

Associated Gene:

Gene:

MYCN

Ensembl Gene ID:

ENSAPLG00000009825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039407

104995446 - 105000189

4744

ENSAPLT00000010242

104996240 - 104999246

3007