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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105163777_105169449_F

Intron Information:

Intron Rank:

123318

Intron Class:

major

Intron Phase:

Intron Coordinates:

105163777 - 105169449

Intron Length:

5673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCATCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GATCCTTTCATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

78.1

31.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.7

0.71

0.8

73.3

36.9

Minor 5ss

29.1

-2.4

2.6

31.9

42.1

Minor BPS

51.9

0.04

1.7

61.6

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020337

105160302 - 105169641

9340