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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105256982_105257196_F

Intron Information:

Intron Rank:

137687

Intron Class:

major

Intron Phase:

Intron Coordinates:

105256982 - 105257196

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTGCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTGATTTGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

61.3

0.25

1.1

59.8

40.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

49.3

-0.2

1.7

56.94

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036585

105256627 - 105258074

1448