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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10531995_10540034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10531995 - 10540034

Intron Length:

8040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGACTAA

5'SS Class:

major

3'SS Sequence:

CTTGTTTTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TAAAAATTTATT

Flanking Amino Acid:

LTPSTSCQEKCEHDVTAWVY

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

64.4

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.1

0.63

72.6

42.4

Minor 5ss

41.1

-1

3.3

54.8

49.4

Minor BPS

43.8

-0.4

61.43

41.8

Associated Gene:

Gene:

AFTPH

Ensembl Gene ID:

ENSAPLG00000009640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041774

10531851 - 10574111

42261