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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105369246_105371032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105369246 - 105371032

Intron Length:

1787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

AATTCAAGACTT

Flanking Amino Acid:

ASVCKVMLETPEYRSRFTSE

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

79.1

37.5

Major BPS

74.2

0.6

0.9

75.7

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

-0.2

2.8

71.9

38.1

Minor BPS

42.5

-0.4

2.1

63.12

40.5

Associated Gene:

Gene:

FAM49A

Ensembl Gene ID:

ENSAPLG00000009498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022417

105364329 - 105385345

21017

ENSAPLT00000018909

105364329 - 105387098

22770

ENSAPLT00000009959

105364329 - 105403540

39212

ENSAPLT00000037260

105364329 - 105387098

22770