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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105374145_105385265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105374145 - 105385265

Intron Length:

11121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TACCTTTTGACT

Flanking Amino Acid:

NYPHFFLDFENAQPTDGERE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.1

0.63

0.8

77.3

36.7

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

62.1

0.46

1.2

72.6

38.5

Associated Gene:

Gene:

FAM49A

Ensembl Gene ID:

ENSAPLG00000009498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037260

105364329 - 105387098

22770

ENSAPLT00000009959

105364329 - 105403540

39212