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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10558285_10560558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10558285 - 10560558

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTATTA

Flanking Amino Acid:

VIVPMYAAGLGMLEPTKEPL

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

80.5

34.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

83.3

0.75

0.8

81.7

35.3

Minor 5ss

49.9

-0

2.8

70.4

41.2

Minor BPS

60.6

0.33

1.8

73.96

37.6

Associated Gene:

Gene:

AFTPH

Ensembl Gene ID:

ENSAPLG00000009640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043917

10538650 - 10574111

35462

ENSAPLT00000041774

10531851 - 10574111

42261

ENSAPLT00000019796

10538883 - 10574111

35229

ENSAPLT00000010054

10538650 - 10574111

35462