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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10561069_10561575_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10561069 - 10561575

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATGGGTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

GATGACTTGATT

Flanking Amino Acid:

MTTEETVASTGELMDVWTEL

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

35.1

Major BPS

84.6

0.86

41.2

Major PPT

60.6

0.24

1.1

53.9

45.4

Minor 5ss

33.3

-1.9

2.9

35.7

40.8

Minor BPS

54.9

0.24

1.6

69.67

41.3

Associated Gene:

Gene:

AFTPH

Ensembl Gene ID:

ENSAPLG00000009640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043917

10538650 - 10574111

35462

ENSAPLT00000041774

10531851 - 10574111

42261

ENSAPLT00000019796

10538883 - 10574111

35229

ENSAPLT00000010054

10538650 - 10574111

35462