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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10561728_10572332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10561728 - 10572332

Intron Length:

10605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTCTCTTTGATA

Flanking Amino Acid:

QSQEPAPSAQTTLLGRLERI

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

0.85

0.9

39.9

Major PPT

72.9

0.52

0.9

68.6

36.5

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

0.75

1.1

77.56

33.5

Associated Gene:

Gene:

AFTPH

Ensembl Gene ID:

ENSAPLG00000009640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043917

10538650 - 10574111

35462

ENSAPLT00000041774

10531851 - 10574111

42261

ENSAPLT00000019796

10538883 - 10574111

35229

ENSAPLT00000010054

10538650 - 10574111

35462