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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105983213_105984974_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

105983213 - 105984974

Intron Length:

1762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATAGTTC

5'SS Class:

weak_major

3'SS Sequence:

ATTATGTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTCACTGATA

Flanking Amino Acid:

RCLDEFDVYMDMVNRRIAMD

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.1

61.6

37.7

Major BPS

75.9

0.64

66.1

40.5

Major PPT

73.9

0.54

0.9

70.8

40.3

Minor 5ss

46.9

-0.3

3.2

63.7

43.5

Minor BPS

51.8

0.05

1.9

69.49

36.2

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263