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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105985128_105986297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105985128 - 105986297

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

TCTTTATTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTATCTTTATTT

Flanking Amino Acid:

DHKNETLSITVQPGEEDKAA

Intron Amino Acid Position:

978

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.1

32.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

77.2

0.61

75.8

37.4

Minor 5ss

44.1

-0.6

2.9

63.8

41.6

Minor BPS

70.4

0.72

1.5

84.48

36.6

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263