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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105986404_105988393_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

105986404 - 105988393

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TAACTGATTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CATGATTTAACT

Flanking Amino Acid:

QRFRIYRQFLRLLSLRCKLY

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

59.6

0.22

1.2

61.4

43.2

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

60.2

0.4

1.7

73.69

43.2

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263