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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105988520_105989229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105988520 - 105989229

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

TTAATTAAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTCTGTTAATT

Flanking Amino Acid:

NHHGNREEIIQQFLDAKERY

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

39.5

Major BPS

84.4

0.85

34.5

Major PPT

64.5

0.33

1.1

60.2

43.7

Minor 5ss

38.1

-1.3

3.1

55.9

42.3

Minor BPS

63.4

0.5

84.73

36.1

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263