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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105990275_105991178_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

105990275 - 105991178

Intron Length:

904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGATA

5'SS Class:

major

3'SS Sequence:

TATTCAAAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TACTTTTCAAAT

Flanking Amino Acid:

QVEEIAGPIKDELSKADSEV

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

69.8

42.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

58.5

0.19

53.8

39.3

Minor 5ss

40.3

-1.1

3.4

57.3

Minor BPS

54.2

0.21

1.6

70.07

40.9

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263