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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105991350_105993124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105991350 - 105993124

Intron Length:

1775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AATATTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCGTTTTAAAA

Flanking Amino Acid:

ENQSVDIRILEDVSEENKKK

Intron Amino Acid Position:

749

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.2

0.45

1.1

65.4

44.6

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

59.5

0.29

1.5

67.32

39.7

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263