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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105993206_105993770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105993206 - 105993770

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

GTAAACTTAATA

Flanking Amino Acid:

RHRQHQKELQIKIRTTKAEI

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

91.8

0.94

0.7

84.8

35.4

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

0.34

1.5

67.34

38.4

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009309

105981766 - 106014028

32263

ENSAPLT00000027081

105980642 - 106012172

31531