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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105994286_105996059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105994286 - 105996059

Intron Length:

1774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTC

5'SS Class:

major

3'SS Sequence:

TTGTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTCTATAGGT

Flanking Amino Acid:

RGIEKILLIKSSRKAREVMQ

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.6

39.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

86.8

0.83

0.8

84.8

35.4

Minor 5ss

-1.5

3.5

51.2

39.7

Minor BPS

52.6

0.16

2.1

80.67

41.3

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009309

105981766 - 106014028

32263

ENSAPLT00000027081

105980642 - 106012172

31531