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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105996175_105996316_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105996175 - 105996316

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTGTTGTTACTT

Flanking Amino Acid:

FQDKVYDVRHRGVHHPEFPS

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

71.4

0.53

1.2

63.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

49.7

0.06

2.3

74.52

43.3

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263