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Intron Name: Anas_platyrhynchos_platyrhynchos_3_105998353_105999642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105998353 - 105999642

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TGCTACTGAAAA

Flanking Amino Acid:

YKHKEEDAKLRREEGDMKQE

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

85.8

0.8

0.6

84.8

22.8

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

51.5

0.04

1.8

63.84

41.6

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263