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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106000444_106000830_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106000444 - 106000830

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

GTTTCCTTCACA

Flanking Amino Acid:

ARRKAVNEAEVLYNRVKTEL

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

0.72

0.8

76.1

32.5

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

75.9

0.81

1.7

84.27

35.8

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263