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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106002372_106002544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106002372 - 106002544

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

TSLQIEQGEERLQELKQLYN

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263