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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106003186_106004027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106003186 - 106004027

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTAACATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TATAAAATAAAA

Flanking Amino Acid:

LGILDHFNIQVDNPMSVLTQ

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

28.2

Major BPS

65.3

0.38

71.6

30.1

Major PPT

73.9

0.54

0.9

65.9

39.3

Minor 5ss

34.4

-1.8

3.3

49.3

46.9

Minor BPS

43.5

-0.5

58.87

39.2

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009309

105981766 - 106014028

32263

ENSAPLT00000027081

105980642 - 106012172

31531