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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106004090_106004564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106004090 - 106004564

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGTGTT

5'SS Class:

major

3'SS Sequence:

TTCTCTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTTAT

U12 Branch Point Sequence:

TTTCTTTGGACC

Flanking Amino Acid:

SRSYRLKSKSGTVVSSKKEE

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

40.4

Major BPS

68.8

0.47

1.3

59.6

46.8

Major PPT

85.6

0.8

0.7

84.3

23.5

Minor 5ss

33.7

-1.9

3.5

46.9

Minor BPS

58.2

0.24

1.4

71.34

33.5

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263