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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106004702_106005825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106004702 - 106005825

Intron Length:

1124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

SLKMFVKTGATSADISITLR

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027081

105980642 - 106012172

31531

ENSAPLT00000009309

105981766 - 106014028

32263