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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106008433_106009589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106008433 - 106009589

Intron Length:

1157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

AATATCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATTAAAA

Flanking Amino Acid:

SFDSNLSSVSTVGEVGIIES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.1

37.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.38

Minor 5ss

42.4

-0.8

2.9

59.1

45.4

Minor BPS

58.3

0.26

1.9

74.02

36.5

Associated Gene:

Gene:

SMC6

Ensembl Gene ID:

ENSAPLG00000008910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009309

105981766 - 106014028

32263

ENSAPLT00000027081

105980642 - 106012172

31531