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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106020302_106021834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106020302 - 106021834

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAC

5'SS Class:

major

3'SS Sequence:

ATTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

CATACAATAAAT

Flanking Amino Acid:

VYRNFAMNAKEPYLDCYTMS

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

64.6

35.9

Major BPS

65.7

0.39

71.3

30.3

Major PPT

87.1

0.83

0.7

81.6

29.6

Minor 5ss

43.2

-0.7

3.1

58.4

46.5

Minor BPS

46.6

-0.1

66.08

43.3

Associated Gene:

Gene:

GEN1

Ensembl Gene ID:

ENSAPLG00000008596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008949

106015969 - 106031878

15910