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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106024184_106024682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106024184 - 106024682

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

ACCATCCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TATTTTGTAATG

Flanking Amino Acid:

EALRGQNLLQRFEQWKEFQY

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

68.2

0.41

0.9

58.5

37.7

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

53.1

-0

63.33

39.5

Associated Gene:

Gene:

GEN1

Ensembl Gene ID:

ENSAPLG00000008596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008949

106015969 - 106031878

15910