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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106024772_106025594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106024772 - 106025594

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTGTATATCT

Flanking Amino Acid:

VIHCSECHHPGSYKEHERSG

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.2

81.5

32.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.3

0.64

0.8

73.5

31.5

Minor 5ss

31.7

-2.1

3.1

40.9

45.4

Minor BPS

-0

2.2

41.9

Associated Gene:

Gene:

GEN1

Ensembl Gene ID:

ENSAPLG00000008596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008949

106015969 - 106031878

15910