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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106025899_106025998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106025899 - 106025998

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAGC

5'SS Class:

major

3'SS Sequence:

TTTTTATCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTCTTAAACT

Flanking Amino Acid:

NSCEGFPFSEVIQEFLVNKN

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.63

76.8

36.7

Minor 5ss

39.4

-1.2

2.9

52.8

43.9

Minor BPS

65.5

0.57

1.7

78.9

Associated Gene:

Gene:

GEN1

Ensembl Gene ID:

ENSAPLG00000008596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008949

106015969 - 106031878

15910