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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106029695_106029819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106029695 - 106029819

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TCATGTTTGATC

Flanking Amino Acid:

KSEALAKKQRNRKNKPKEKE

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

74.4

Major BPS

79.4

0.73

80.1

Major PPT

96.3

1.04

0.5

95.7

14.9

Minor 5ss

36.2

-1.6

2.9

37.7

Minor BPS

51.8

0.04

1.8

61.3

39.2

Associated Gene:

Gene:

GEN1

Ensembl Gene ID:

ENSAPLG00000008596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008949

106015969 - 106031878

15910