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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106055775_106055912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106055775 - 106055912

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AATGTTTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AGAATATTAAAA

Flanking Amino Acid:

RSCNPGKHRLDRSTEPQPHG

Intron Amino Acid Position:

873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

65.7

0.35

64.4

41.7

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

47.5

-0.1

1.7

55.05

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046981

106054441 - 106068334

13894

ENSAPLT00000022409

106054441 - 106068334

13894

ENSAPLT00000008442

106055162 - 106068334

13173