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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10646163_10646773_F

Intron Information:

Intron Rank:

124120

Intron Class:

major

Intron Phase:

Intron Coordinates:

10646163 - 10646773

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

TGCTTTGTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

ATGTGTCTATGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.6

40.1

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

72.1

0.5

0.9

41.2

Minor 5ss

37.2

-1.5

46.8

42.6

Minor BPS

-0.9

2.2

48.56

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021993

10642275 - 10650682

8408

ENSAPLT00000047273

10639827 - 10649186

9360

ENSAPLT00000044129

10641926 - 10647103

5178