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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10646919_10648196_F

Intron Information:

Intron Rank:

124121

Intron Class:

major

Intron Phase:

Intron Coordinates:

10646919 - 10648196

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TGCTGTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ACTATTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.1

59.4

39.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

65.3

0.35

1.1

60.8

44.7

Minor 5ss

33.5

-1.9

3.5

44.1

39.2

Minor BPS

51.9

0.04

1.6

60.47

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047273

10639827 - 10649186

9360

ENSAPLT00000021993

10642275 - 10650682

8408