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Intron Name: Anas_platyrhynchos_platyrhynchos_3_106776973_106788347_R

Intron Information:

Intron Rank:

154127

Intron Class:

major

Intron Phase:

Intron Coordinates:

106776973 - 106788347

Intron Length:

11375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGA

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TATATATTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

42.7

Major BPS

71.4

0.53

67.3

39.3

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

31.9

-2.1

3.1

39.5

46.1

Minor BPS

52.4

0.15

1.9

74.9

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042396

106776525 - 106788644

12120

ENSAPLT00000018343

106776525 - 106791697

15173