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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107247682_107249367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107247682 - 107249367

Intron Length:

1686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TGTTCTTCAATG

Flanking Amino Acid:

QGKFFQLEINDPYAGPVLLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.2

35.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

81.9

0.72

0.8

76.4

32.3

Minor 5ss

29.2

-2.4

2.8

32.4

36.1

Minor BPS

64.4

0.31

1.6

68.3

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026809

107247258 - 107263627

16370

ENSAPLT00000008052

107247258 - 107261448

14191