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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107249496_107250995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107249496 - 107250995

Intron Length:

1500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

ATCTGCTGAATT

Flanking Amino Acid:

SVLGCHVANEADELFSLTVN

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

0.77

0.7

76.5

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

0.3

1.9

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026809

107247258 - 107263627

16370

ENSAPLT00000008052

107247258 - 107261448

14191