Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_107259898_107259978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107259898 - 107259978

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

CTTCCCTTGAGT

Flanking Amino Acid:

SCNFNPSAFIICHPDGTIMI

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

77.9

0.69

78.3

31.3

Major PPT

75.3

0.57

0.9

37.2

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

65.9

0.58

1.7

80.72

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026809

107247258 - 107263627

16370

ENSAPLT00000008052

107247258 - 107261448

14191